In the history of rice-shrimp farming (RSF) in the Mekong Delta, in saline acid sulfate soils (ASS), RSF has proved its sustainability as there is no long-term accumulation of acidity and salinity that adversely affect RSF production. However, the soil processes involved in this phenomenon are not well understood. This study aimed to determine the significant changes in soil and water chemical indicators associated with soil processes during different stages of RSF. Sampling was conducted in six stages to determine the pH and electrical conductivity (EC) of canal and field water, and the pHe, ECe, and sodium-soluble saturated extract (Na-sol) of surface soil (surS) and subsurface soil (subS) in the low-salinity area (LSA) and high salinity area (HSA) of Bac Lieu province. Putative exchange (exch.) Na+ hydrolysis occurs at the beginning of the rainy season when excess salts are leached. This drastically increases the pH of the field water by 0.6 pH units, from 8.2 to 8.8 in stages 1 to 2, respectively. Putative sulfurization has been shown to occur in subS in both LSAs and HSAs, with a significant decrease of 0.5 pH units from stages 4 to 5, leading to a decrease in the Na-sol of subS through exch. Na+ transformation. Simultaneously, with active soil preparation and liming for RSF, chemical processes such as exch. Na+ hydrolysis, sulfurization, and Na+ transformation are the main factors promoting exch. Na+ desorption, which help to reduce the long-term build-up of salinity and acidity that adversely affect RSF production. Although gypsum is considered an effective material in improving saline soils, in Vietnam, gypsum is the liming material of CaSO4; however, it is not commonly used in agriculture because of its high cost. By using CaCO3 or dolomite as a liming material in saline ASS, the dissolution of lime by sulfuric acid can provide a good opportunity for soil improvement and rice growth in RSF.